Search result for Genome assembly Online Courses & Certifications
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Bacterial Bioinformatics
by Rebecca Wattam- 4.8
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Approx. 14 hours to complete
Sharing a genome with other PATRIC users Copying a genome annotation job to a shared workspace Assembly Introduction to genome assembly Uploading read files to the workspace for assembly Submitting reads to the Genome Assembly Service Selecting assembly strategies and submitting the assembly job Monitoring the assembly job and reviewing job results Review of genome assembly...
Bioinformatics Capstone: Big Data in Biology
by Phillip Compeau , Pavel Pevzner- 4.1
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Approx. 14 hours to complete
In particular, in a series of Application Challenges will see how genome assembly can be used to track the source of a food poisoning outbreak, how RNA-Sequencing can help us analyze gene expression data on the tissue level, and compare the pros and cons of whole genome vs....
Algorithms and Data Structures Capstone
by Pavel Pevzner , Phillip Compeau- 0.0
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4 Weeks
After a brief introduction to the steps required to build a genome assembler, we will let you take steps on your own to start working with real data taken from a sequencing machine and see if you can design genome assembly software that can compete with popular software used in hundreds of sequencing labs around the world every day....
$150
Genome Assembly Programming Challenge
by Alexander S. Kulikov , Michael Levin , Pavel Pevzner , Neil Rhodes- 4.5
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Approx. 18 hours to complete
In this Genome Assembly Programming Challenge, you will follow in the footsteps of the bioinformaticians investigating the outbreak by developing a program to assemble the genome of the E. Assembling phage genome Genome Assembly Faces Real Sequencing Data Splitting the genome into contigs Genome assembly faces real sequencing data...
Hacking COVID-19 — Course 1: Identifying a Deadly Pathogen
by Mikhail Rayko , Sabeel Mansuri , Vikram Sirupurapu , Pavel Pevzner , Niema Moshiri- 4.8
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Approx. 7 hours to complete
This first course will only discuss the assembly of the SARS-CoV-2 genome, but future courses in this series will explore follow-up bioinformatics analyses used in the COVID-19 pandemic....
Graph Algorithms in Genome Sequencing
by Pavel Pevzner , Phillip Compeau- 0.0
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3 Weeks
Learn how graphs are used to assemble millions of pieces of DNA into a contiguous genome and use these genomes to construct a Tree of Life. In the first part of the course, you will learn how genome sequencing relies on using a graph to assemble millions of tiny DNA fragments into a contiguous genome. Algorithms for genome assembly...
$150
Analyze Your Genome!
by Pavel Pevzner , Phillip Compeau , Niema Moshiri- 0.0
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4 Weeks
You will learn current best-practice workflows for Genome Assembly, Variant Calling, Trio Analysis, and Differential Expression Analysis as well as the types of biological problems that motivate them. How to reconstruct a genome by stringing together its tiny fragments using popular genome assembly tools to sequence a pathogen...
$49
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Whole genome sequencing of bacterial genomes - tools and applications
by Lina Cavaco , Pimlapas Leekitcharoenphon- 4.6
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Approx. 7 hours to complete
This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. Describe how to do de novo assembly from raw reads to contigs Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...
Learn Bioinformatics in 6 Days
by Isaac Alfred- 0.0
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4.5 hours on-demand video
Day 6 - Genome Analysis The detail parts begin with the sequencing technologies and followed with genome assembly and annotation....
$13.99
Algorithms for DNA Sequencing
by Ben Langmead, PhD , Jacob Pritt- 4.7
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Approx. 12 hours to complete
Practical: Downloading and parsing a genome Lecture: Genome indexes used in research Lecture: First and second laws of assembly Algorithms for assembly...
